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A Comprehensive Introduction To Your Genome With the SciPy Stack

Genome data is one of the most widely analyzed datasets in the realm of Bioinformatics. The SciPy stack offers a suite of popular Python packages designed for numerical computing, data transformation, analysis and visualization, which is ideal for many bioinformatic analysis needs.

In this tutorial, Toptal Software Engineer Zhuyi Xue walks us through some of the capabilities of the SciPy stack. He also answers some interesting questions about the human genome, including: How much of the genome is incomplete? How long is a typical gene?

23 minute readContinue Reading
Zhuyi Xue

Zhuyi Xue

Computational Geometry in Python: From Theory to Application

When people think computational geometry, in my experience, they typically think one of two things:

  1. Wow, that sounds complicated.
  2. Oh yeah, convex hull.

In this post, I’d like to shed some light on computational geometry, starting with a brief overview of the subject before moving into some practical advice based on my own experiences in computational geometric programming with Python.

15 minute readContinue Reading
Charles Marsh

Charles Marsh

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